Here is a list of all class members with links to the classes they belong to:

- r -

• readAhead : ESTAnalyzer
• readline() : InteractiveConsole
• readLine() : MatrixFileAnalyzer
• recvCount : MPIStats
• reduceCount : MPIStats
• referenceFrame : FWAnalyzer
• referenceHashMap : CLU::CLUESTData
• refESTidx : CachedESTInfo , ClusterMaker , ESTAnalyzer , Heuristic
• refESTLen : NewUVHeuristic
• refShiftUpdateFd() : D2Zim
• remove_arg() : arg_parser
• repopulate() : EST
• REPOPULATE_REQUEST : MSTClusterMaker , PMSTClusterMaker
• repopulateCaches : MSTCache
• report() : ResultLog
• reportLine() : ResultLog
• ResultLog() : ResultLog
• revCompTable : ESTCodec
• revCompTables : ESTCodec
• rightShiftUpdateFd() : D2Zim
• root : MSTClusterMaker
• runCount : Filter , Heuristic
• runD2() : D2
• runD2Asymmetric() : TwoPassD2
• runD2Bounded() : TwoPassD2
• runFilter() : LengthFilter , Filter , LCFilter
• runHeuristic() : NewUVHeuristic , UVSampleHeuristic , Heuristic , TVHeuristic