Uses of Class
org.peace_tools.data.MSTNode

Packages that use MSTNode

org.peace_tools.data

Contains the classes that provide data for the various views in the GUI.

Uses of MSTNode in org.peace_tools.data

Fields in org.peace_tools.data declared as MSTNode

private MSTNode	MSTNode.parent The parent node for this MSTNode.
private MSTNode	MST.root The root of the MST node.

Fields in org.peace_tools.data with type parameters of type MSTNode

private java.util.ArrayList<MSTNode>

MSTNode.childNodes This array list contains the list of child nodes for this node.

Methods in org.peace_tools.data that return MSTNode

MSTNode

MST.getRoot() Obtain the root node of this MST.

Methods in org.peace_tools.data that return types with arguments of type MSTNode

java.util.ArrayList<MSTNode>

MSTNode.getChildren() Obtain the child nodes for this node.

Methods in org.peace_tools.data with parameters of type MSTNode

void	MSTNode.addChild(MSTNode node) Add another MSTNode as the child node of this node.
private void	OverlapModel.generateESTEntries(MSTNode parent, int startPos, int[] clusterIDList, int prevClusterID, int lastRow, java.util.ArrayList<java.lang.Long> rowUsage) Recursive method to generate ESTEntry objects with alignment information.
private int	OverlapModel.getFarthestPos(MSTNode parent) Helper method to determine how far-left the pre-alignment extends given the root is at logical position zero.
void	MSTNode.print(java.io.PrintStream out, MSTNode node, java.lang.String indent) Method to recursively print the information that is stored in this node.

Method parameters in org.peace_tools.data with type arguments of type MSTNode

protected static boolean

MST.makeMSTNode(java.util.HashMap<java.lang.Integer,MSTNode> nodeList, java.lang.String line) Helper method to process a comma separated set of values representing a MST node.

Constructors in org.peace_tools.data with parameters of type MSTNode

MSTNode(MSTNode parent, int estIndex, float nodeMetric, int alignment)
Constructor to create a MSTNode.