Uses of Class
org.peace_tools.data.ClusterNode

Packages that use ClusterNode

org.peace_tools.data	Contains the classes that provide data for the various views in the GUI.
org.peace_tools.views	Contains the classes that provide views for the various data objects in the GUI.

Uses of ClusterNode in org.peace_tools.data

Fields in org.peace_tools.data declared as ClusterNode

private ClusterNode	ClusterNode.parent The parent cluster for this MSTcluster.
private ClusterNode	ClusterFile.root The root of the cluster node.

Fields in org.peace_tools.data with type parameters of type ClusterNode

private java.util.ArrayList<ClusterNode>	ClusterNode.children This array list contains the list of child clusters and EST nodes contained by this cluster node.
private java.util.ArrayList<ClusterNode>	OverlapModel.clusterList This list contains the list of clusters (that may be sorted) being displayed to the user.

Methods in org.peace_tools.data that return ClusterNode

ClusterNode	OverlapModel.getElementAt(int index) Obtain the cluster node in the combo box list at a given index.
ClusterNode	ClusterTreeTableModel.getRoot() Obtain the top-level root node.
ClusterNode	ClusterFile.getRoot() Obtain the top-level root cluster for this cluster file.
ClusterNode	OverlapModel.getSelectedItem() Obtain the currently displayed cluster in the combo box.

Methods in org.peace_tools.data that return types with arguments of type ClusterNode

java.util.ArrayList<ClusterNode>

ClusterNode.getChildren() Obtain the child nodes associated with this node.

Methods in org.peace_tools.data with parameters of type ClusterNode

void	ClusterNode.addChild(ClusterNode node) Add another cluster as the child cluster of this cluster node.
private static void	OverlapModel.generateClusterLookupTable(int parentClusterID, ClusterNode node, int[] clusterIDList) Helper method to build a table (simple array) that provides clusterID for each fragment.
void	ClusterNode.print(java.io.PrintStream out, ClusterNode cluster, java.lang.String indent) Method to recursively print the information that is stored in this cluster.

Method parameters in org.peace_tools.data with type arguments of type ClusterNode

protected static void

ClusterFile.makeClusterNode(java.util.ArrayList<ClusterNode> nodeList, java.lang.String line) Helper method to process a comma separated set of values representing a cluster node.

Constructors in org.peace_tools.data with parameters of type ClusterNode

ClusterNode(ClusterNode parent, boolean estNode, int id, java.lang.String name)
Constructor to create a Cluster.

Uses of ClusterNode in org.peace_tools.views

Methods in org.peace_tools.views with parameters of type ClusterNode

private void

ClusterSummaryView.drawClassificationBars(java.awt.Graphics g, java.awt.Rectangle barArea, ClusterNode cluster) Draw clustering classification information in the graph.